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Biology Division, LCC

 

Schedule

 

Kabi R. Neupane, Ph.D.

Instructor, Biology and Biotechnology, LCC, Hawaii

 

 

 

              

 

 

Biology 201 is offered only in Spring semesters at LCC. 
Materials presented here are dated and may not be available. 
Please visit in Spring of 2004 for updated contents.

 

Leeward Community College

BIOLOGY 201

Spring Semester 2002

Room: MS 105

 

Instructor: Kabi R. Neupane;       Office: MS 107;        Email: Kabi @hawaii.edu

 Lecture hours: MWF 9:00-9:50 am

Office hours: MWF ( 11:00am -12:00noon); MW ( 5:00-6:00 pm )

Internet: http://emedia.leeward.hawaii.edu/kabi

WebCT: http://webct.hawaii.edu

 REQUIRED TEXTBOOKS:

Grace E. S. (1997) Biotechnology Unzipped: Promises and Realities. Joseph Henry Press
Washington, D.C.

You can read this book for free at:  http://print.nap.edu/pdf/0309057779/pdf_image/

 PREREQUISITES:

Credit in at least one 3 credit 100-level biological sciences course or consent of instructor and a grade of 'C' or better in Eng 21 or Eng 22.

 DESCRIPTION:

Biotechnology and society (Credit 3) - Introduction to the basic concepts, goals and practical impacts of biotechnology.  Real-life case studies are used to explore socio-ethical, economic and environmental issues raised by cloning, DNA testing, gene therapy and genetically engineered food, medicines and vaccines using microbes, plants and animals.

 COURSE OBJECTIVES:

Upon successful completion of the course the student shall be able to:

1.  Define the term "biotechnology," and access current research in the field.

2.  Describe the characteristics of DNA, and explain its uses in biotechnology.  

3.  Explain basic principles and concepts of biotechnology including concepts of gene expression, recombinant DNA methodology, cloning and genetic engineering.

4.  Define and explain DNA probes, DNA fingerprinting, and DNA amplification.

5.  Explain the function of the healthy immune system, the concept of genetic disease, and the application of gene therapy to genetic disease.

6.  Define the term "designer drug," and explain the pros and cons of synthetically or genetically engineering pharmaceuticals.

7.  Explain the advantages and disadvantages of genetic engineering in agriculture. 

8.  Explain how pharmaceuticals can be made from farm animals.

9.  Define the term "bioremediation," and explain the advantages and disadvantages of applying biotechnological solutions to environmental problems.

10. Explain opportunities in marine biotechnology. 

11. Describe applications of biotechnology in creating fast- growing and healthy trees. 

12. Introduce emerging fields of bioinformatics, genomics and proteomics.

13. Explain ethical issues related to biotechnology in the areas of environmental safety and food safety, and identify some of the economic, moral, ethical, and legal issues surrounding biotechnology.

14. Explain the concept of gene therapy, and identify advantages and disadvantages of its use.  

15. Describe the Human Genome Project (HGP) and the ethical, legal, and social implications of the project.

SCHEDULE CHANGE:

I may change the order or content of the lectures and/or labs if I feel that such change(s) will benefit the class. You will be informed in advance of changes, if any.

GRADING:

The examinations will cover material presented in lectures, videos and the text. The emphasis of each exam will be on material covered in class. The exams' format will be multiple choice, short answer, and short essays.  You are strongly urged to attend each class and continually review the text and lecture notes.

Distribution of points:

3 lecture exams (100 to 150 points each)                        350

Group Report                                                                200

Individual Presentation                                                   100

Final Examination                                                          150

Total                                                                            800

  A=720+; B=800+; C=700+; D=600+; F= less than 600.

The final exam will be cumulative. You will need to purchase your own Scantron forms from the bookstore (15 cents each) for the tests and final exam.  If you forget to bring a Scantron to the test, you may buy one from the Instructor for $1.00.  However, any and all tests, except the lab examination, may be taken over the WebCT. There will be one laboratory test at the end.

Please note that the last day to withdraw from the course without “W” is February 3, 2003 and it is your responsibility to drop the course by that date. Simply stopping to come to the class will result in an F for the course.  An I grade is given only under extreme circumstances.  There will be no make-up exams unless under extreme circumstances or prior arrangement with the instructor. However, there will be no make-up lab examination.

CLASS RULES, SUGGESTIONS AND PARTICIPATION: I wish to create a relaxed atmosphere that is conducive to learning. Your participation and cooperation is very important for maintaining the class environment that we can all enjoy. Please feel free to ask questions and or ask me to repeat myself. For some questions that may require individual attention, it may be best to utilize the scheduled meeting hours or arrange a meeting in my office.  Please refrain from behavior (s) that are distracting to the class or are inappropriate for a sound learning environment. I am open to suggestions regarding pedagogical techniques for delivery of difficult concepts.

NONDISCRIMINATION POLICY: I uphold the University of Hawaii's nondiscrimination policy in my classes.  Any discriminatory acts or language on the basis of race, religion, age, sex, national origin, ancestry, disabilities or sexual orientation will NOT be tolerated. In addition, my classroom and office are UH designated Safe Zones. The Safe Zone program is committed to creating and maintaining a positive social and academic environment for gay, lesbian, bisexual and transgender students. Again, any discriminatory acts or language on the basis of sexual orientation will NOT be tolerated.

Students with disabilities who believe that they may need accommodations in this class are encouraged to contact the Coordinator of the KÄKO‘O ‘IKE (KÏ) program located in L-208 of Leeward Community College’s library building as soon as possible to ensure that such accommodations are implemented in a timely fashion.

Lecture Schedule

Day     Date      Lecture topic

Section I: Introduction, Origins & Tools of Biotechnology. (Chapters 1 & 2)

Mon     1/13    Introduction to Biotechnology, Definition, Historical perspective, Challenges for the 21st Century, Social Impact        

Wed    1/15    Overview of Socio-ethical  Impacts, Introduction to Cell Structure,        

Fri       1/17    More on cell  and DNA structure.  How does a gene code for a protein?         

Mon     1/20    Martin Luther King Jr. Day ( HOLIDAY )

Wed    1/22    Bacteria, Phages, plasmids, restriction enzymes 

Fri       1/24    Cloning a gene is different than cloning plants, animals, cells

Mon     1/27   More on cloning plants, animals, cells     

Wed    1/29   Molecular Diagnostics: Antibodies, Monoclonals, ELISAs  

Fri       1/31   Molecular Diagnostics:   DNA/RNA probes, primers.  REPORT GROUPS

Mon     2/3    Molecular Diagnostics:   DNA fingerprinting, RFLP, forensics 

Wed    2/5    Molecular Diagnostics:   PCR  and applications   

Fri       2/7     Pre-implant Genetic Diagnostics, Socio-ethical Issues

Mon     2/10     ******** Exam 1 ******** (150 points) 

Section II:     Biotechnology and People and agriculture (Chapter 3 and 4)

Wed    2/12     Human Genetic Diseases, stem cells, Intro to Gene Therapy    

Fri       2/14    Human Gene Therapy          

Mon     2/17     Presidents Day ( Holiday )

Wed    2/19     Human Genome Project, TOPIC SELECTION DUE       

Fri    2/21        Issues in Health care: Double-Edged Sword                

Mon    2/24    Microbes & Plants in Medicine, Interferon, Genes & Vaccines  

Wed     2/26     More on Genes & Vaccines, Tryptophan Case                

Fri     2/28     Introduction,   BST & Milk; Pesticides, Herbicide Resistance; Regulations 

Mon     3/3      Basic Principles of Plant Engineering                     

Wed    3/5      What is Bt?  Engineering a plant with the Bt gene 

Fri       3/7     Viruses  & Plants; Engineered Coat Protein Resistance; Rainbow Papaya    

Mon     3/10    Pests, Diseases, Pharmaceuticals, genomics, bioinformatics  

Wed    3/12     Freezing  tolerance ;  Soil bacteria and fertilizer             

Fri       3/14    AgBiotechnology   Case Studies Video     

Mon     3/17    ******** Exam 2 ******** (100 points)                        

Section III:    Environment, Marine and Forest Biotechnology (Chapter 5 & 6)

Wed    3/19    Concerns about release of GMO's, bacteria, pollen          

Fri       3/21    Microbes & Bioremediation                         

Mon     3/31    Microbes, Mines & Mining

Wed   4/2       Aromatic  Hydrocarbons , Biofuels  

Fri       4/4       An ocean of opportunity, New drugs and medicines from the ocean

Mon     4/7       Fuels from the sea 

Wed    4/9       Fish and Biotechnology       

Fri       4/11    Biotechnology and Trees      

Mon     4/14    ******** EXAM 3 ******** (100%)     

Section VII:  Overview of Social Impacts and Ethical Issues

Wed    4/16    Commercialization, Introduction , Intellectual Property Rights,  Patents

Fri       4/18    Good Friday ( Holiday )

Mon     4/21    Issues around Patenting 

Wed    4/23   Government Regulation  I, NIH, EPA, FDA, USDA  

Fri       4/25    Biotechnology in the media GROUP PROJECTS DUE

Mon     4/28    Student Presentations                                  

Wed    4/30    Student Presentations                                              

Fri       5/2       Student Presentations         

Wed    5/14    FINAL EXAMINATION: 7:45am to 9:45am (150 POINTS; CUMULATIVE)

GROUP PROJECTS AND INDIVIDUAL PRESENTATION

1. Group Project (150 points): Students will work in small groups to select biotechnology articles impacting society. The articles should be recently published in refereed journals, or reputable magazines and newspapers.  Each article shall be thoroughly discussed in the group to understand issues and impacts of the publication.  After the group discussion and articulation of different views, a 4 to 5 page review will be submitted by the group. The number of articles reviewed by a group will be equal to the number of students in the group.

2. Individual Presentation (100 points): Each student will be required to give an oral presentation on a current issue of biotechnology. The student will research a topic of his/her interest from library, the Internet or the text book.

Students are encouraged to contact the instructor in regard to any aspect of the course.   Each student is expected to attend all meetings of this class. Absence from more than three classes may adversely impact the course grade. Students are not excused from the exams except in case of personal illness or death in the immediate family.

INDIVIDUAL ASSIGNMENT:   Individual Presentation on Current Issues in Biotechnology

Purpose: To understand one current subject in biotechnology in depth and communicate it to others.

At the end of this course, each student will give an oral presentation on a current issue in biotechnology.   Select a topic in biotechnology of interest to you.  Turn in your topic by February 19, 2003 .

Format:  You will give an 18 minute presentation. There will be five minutes set aside for questions from the audience, plus a couple minutes for set-up and introducing the speakers. Feel free to use visual material, overheads, slides, and the blackboard in your delivery.

1.  Research your subject in the library, text and internet.  Obtain thorough background information, read up on it becoming an expert.

2.  In your presentation, introduce the subject and explain the science behind it.  Explain why it is a type of biotechnology.

3.  Give examples of the technology in use.

4.  Describe the influence of the technology on society. Are there benefits and/or disadvantages?

5.  Discuss the following:  Is there controversy associated with the technology? What are the opinions for and against it?  Are the opinions based on fact?

ASSIGNMENT:  Group Project Notebook

Purpose:  To realize the broad impact of biotechnology on society, discuss these impacts with others, articulate concepts to others, listen and understand others' viewpoints and write a cohesive analysis and essays together as a team.

After the first week of class you will be asked to form in small groups.  If you do not choose a group, the professor will assign you to one.  Turn in the list of members in your group by January 31. The project notebooks will consist of the following two components:

1. Three newspaper, magazine, journal or internet articles that focus on the theme "Impact of Biotechnology on Society".  Try to find articles early in the semester.

2. Four paged, typed (11-12 pt font, Times) double-spaced essays on each of the articles.  (Number each page).

3.  A two page summary of your group activities, detailing highlights and records of your meeting discussions.

Instructions:

These articles can be on any aspect of Biotechnology, such as the scientific principles and research involved, the problems in society that will be solved and the possible ethical issues raised. The subject is broad and can include problems in medicine, agriculture, forestry, ecology, forensics, patent law or socio-ethical issues. Subjects can be on what interest you.

Sources of articles, examples (Photocopy the article and place it in a folder or notebook):

Science News

Science

Chemical Engineering News

Wall Street Journal

New York Times

Nature

Nature Biotechnology

California Agriculture

Trends in Biotechnology

The World & I

Popular Science

Time, Newsweek

Horticulture

Agricultural Research (USDA)

Honolulu Advertiser

Biotechniques

Scientific American

Discover

New Scientist

National Geographic

AS A TEAM, for each article, write an essay on the impact of the technology on society. Briefly summarize the article and describe the biotechnology used.  Then focus on answering the following questions to guide your group discussions and essay writing. What scientific concepts are employed and highlighted?  Explain the techniques and science involved. What do you think is significant about the article?  Are there positive (benefits) or negative impacts of the biotechnology on society?  What are the social, economic or ethical issues raised?  Are there socio-ethical issues/concerns, or critical voices, against the technology that are based on fact or based on mistaken beliefs?  Provide rational explanations and counter-arguments.  Why did the article catch your interest?  Feel free to offer contrasting opinions and ideas and relate them to scientific facts.

Hand in your articles and three written essays, organized in a notebook.  Notebooks will be graded on originality, quality, concept understanding and completeness. The group project is due on April 25, 2003 .  Hand in during class.

 

 

nd mail, questions or comments about this web site to kabi@hawaii.edu.
Copyright © 2003 Kabi R. Neupane
Last modified: December 13, 2006
About PowerPoint Presentation: Many PowerPoint files have been adapted from media supplement of the Textbook Publisher, Benjamin Cummings (Pearson Education, Inc.). I strongly recommend students to visit the Publisher’s website at www.essentialbiology.com (Bio 101) or www.campbellbiology.com (Bio 171) and benefit form their online resources.